| getOpenReadingFrameRanges(MarkerRange, int, int, int) |  | 0% |  | 0% | 6 | 6 | 27 | 27 | 1 | 1 |
| getORFsFromStopCodons(int[], int, int, MarkerRange, int, int) |  | 0% |  | 0% | 13 | 13 | 26 | 26 | 1 | 1 |
| getEndOfORF(Marker, boolean) |  | 0% |  | 0% | 7 | 7 | 26 | 26 | 1 | 1 |
| getORFAroundMarker(Marker, boolean) |  | 0% |  | 0% | 2 | 2 | 19 | 19 | 1 | 1 |
| getStartOfORF(Marker, boolean) |  | 0% |  | 0% | 7 | 7 | 22 | 22 | 1 | 1 |
| getCodonAtMarker(Marker) |  | 0% | | n/a | 1 | 1 | 5 | 5 | 1 | 1 |
| makeMarkerRangeFromRawPositions(int, int) |  | 0% |  | 0% | 2 | 2 | 7 | 7 | 1 | 1 |
| addBases(Marker, String) |  | 0% |  | 0% | 2 | 2 | 5 | 5 | 1 | 1 |
| getACount() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
| getTCount() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
| getGCount() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
| getCCount() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
| getMatchingCodons(Range, StringVector) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| deleteRange(MarkerRange) |  | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
| getTranslation(Range, boolean) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getStopCodons(Range) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| makeMarkerRangeFromPositions(int, int) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getRawSubSequenceC(Range) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getRawSubSequence(Range) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| markerRangeBases(MarkerRange) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| makeMarkerFromRawPosition(int) |  | 100% |  | 100% | 0 | 2 | 0 | 3 | 0 | 1 |
| getStrandBases() |  | 100% |  | 100% | 0 | 2 | 0 | 3 | 0 | 1 |
| getDirection() |  | 100% |  | 100% | 0 | 2 | 0 | 3 | 0 | 1 |
| isForwardStrand() |  | 100% |  | 100% | 0 | 2 | 0 | 3 | 0 | 1 |
| getStopOrStartCodons(Range, StringVector) |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| makeMarker(int) |  | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
| getSpacedTranslation(Range, boolean) |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getRawPosition(int) |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getSubSequence(Range) |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| Strand(Bases, int) |  | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
| getSequenceLength() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getBases() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |