| Program name | Description |
| backtranambig |
Back-translate a protein sequence to ambiguous nucleotide sequence
|
| backtranseq |
Back-translate a protein sequence to a nucleotide sequence
|
| checktrans |
Report STOP codons and ORF statistics of a protein
|
| coderet |
Extract CDS, mRNA and translations from feature tables
|
| plotorf |
Plot potential open reading frames in a nucleotide sequence
|
| prettyseq |
Write a nucleotide sequence and its translation to file
|
| remap |
Display restriction enzyme binding sites in a nucleotide sequence
|
| showorf |
Display a nucleotide sequence and translation in pretty format
|
| showseq |
Display sequences with features in pretty format
|
| sixpack |
Display a DNA sequence with 6-frame translation and ORFs
|
| transeq |
Translate nucleic acid sequences
|