| applyMemberFunction(Size(Type::*member_function)()) | ConsensusMap | inline |
| applyMemberFunction(Size(Type::*member_function)() const) const | ConsensusMap | inline |
| Base typedef | ConsensusMap | |
| clear(bool clear_meta_data=true) | ConsensusMap | |
| clearMetaInfo() | MetaInfoInterface | |
| clearRanges() | RangeManager< 2 > | inline |
| clearUniqueId() | UniqueIdInterface | inline |
| ConsensusMap() | ConsensusMap | |
| ConsensusMap(const ConsensusMap &source) | ConsensusMap | |
| ConsensusMap(Base::size_type n) | ConsensusMap | explicit |
| ConstIterator typedef | ConsensusMap | |
| ConstReverseIterator typedef | ConsensusMap | |
| convert(UInt64 const input_map_index, FeatureMap< FeatureT > const &input_map, ConsensusMap &output_map, Size n=-1) | ConsensusMap | inlinestatic |
| convert(UInt64 const input_map_index, MSExperiment<> &input_map, ConsensusMap &output_map, Size n=-1) | ConsensusMap | inlinestatic |
| convert(UInt64 const input_map_index, std::vector< Peak2D > &input_map, ConsensusMap &output_map, Size n=-1) | ConsensusMap | inlinestatic |
| convert(ConsensusMap const &input_map, const bool keep_uids, FeatureMap< FeatureT > &output_map) | ConsensusMap | inlinestatic |
| createIfNotExists_() | MetaInfoInterface | inlineprotected |
| data_processing_ | ConsensusMap | protected |
| DIMENSION enum value | RangeManager< 2 > | |
| DocumentIdentifier() | DocumentIdentifier | |
| DocumentIdentifier(const DocumentIdentifier &source) | DocumentIdentifier | |
| elements (defined in vector< T >) | vector< T > | private |
| ensureUniqueId() | UniqueIdInterface | inline |
| experiment_type_ | ConsensusMap | protected |
| file_description_ | ConsensusMap | protected |
| file_path_ | DocumentIdentifier | protected |
| file_type_ | DocumentIdentifier | protected |
| FileDescriptions typedef | ConsensusMap | |
| getBase_() const | UniqueIdIndexer< ConsensusMap > | inlineprotected |
| getBase_() | UniqueIdIndexer< ConsensusMap > | inlineprotected |
| getDataProcessing() const | ConsensusMap | |
| getDataProcessing() | ConsensusMap | |
| getExperimentType() const | ConsensusMap | |
| getFileDescriptions() const | ConsensusMap | |
| getFileDescriptions() | ConsensusMap | |
| getIdentifier() const | DocumentIdentifier | |
| getKeys(std::vector< String > &keys) const | MetaInfoInterface | |
| getKeys(std::vector< UInt > &keys) const | MetaInfoInterface | |
| getLoadedFilePath() const | DocumentIdentifier | |
| getLoadedFileType() const | DocumentIdentifier | |
| getMax() const | RangeManager< 2 > | inline |
| getMaxInt() const | RangeManager< 2 > | inline |
| getMetaValue(const String &name) const | MetaInfoInterface | |
| getMetaValue(UInt index) const | MetaInfoInterface | |
| getMin() const | RangeManager< 2 > | inline |
| getMinInt() const | RangeManager< 2 > | inline |
| getProteinIdentifications() const | ConsensusMap | |
| getProteinIdentifications() | ConsensusMap | |
| getUnassignedPeptideIdentifications() const | ConsensusMap | |
| getUnassignedPeptideIdentifications() | ConsensusMap | |
| getUniqueId() const | UniqueIdInterface | inline |
| hasInvalidUniqueId() const | UniqueIdInterface | inline |
| hasValidUniqueId() const | UniqueIdInterface | inline |
| id_ | DocumentIdentifier | protected |
| int_range_ | RangeManager< 2 > | protected |
| IntensityRangeType typedef | RangeManager< 2 > | |
| INVALID enum value | UniqueIdInterface | |
| isMapConsistent(Logger::LogStream *stream=0) const | ConsensusMap | |
| isMetaEmpty() const | MetaInfoInterface | |
| isValid(UInt64 unique_id) | UniqueIdInterface | inlinestatic |
| Iterator typedef | ConsensusMap | |
| meta_ | MetaInfoInterface | protected |
| MetaInfoInterface() | MetaInfoInterface | |
| MetaInfoInterface(const MetaInfoInterface &rhs) | MetaInfoInterface | |
| metaRegistry() | MetaInfoInterface | static |
| metaValueExists(const String &name) const | MetaInfoInterface | |
| metaValueExists(UInt index) const | MetaInfoInterface | |
| operator!=(const ConsensusMap &rhs) const | ConsensusMap | |
| OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) const | MetaInfoInterface | |
| RangeManager< 2 >::operator!=(const RangeManager &rhs) const | RangeManager< 2 > | inline |
| operator+=(const ConsensusMap &rhs) | ConsensusMap | |
| operator=(const ConsensusMap &source) | ConsensusMap | |
| OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs) | MetaInfoInterface | |
| RangeManager< 2 >::operator=(const RangeManager &rhs) | RangeManager< 2 > | inline |
| OpenMS::DocumentIdentifier::operator=(const DocumentIdentifier &source) | DocumentIdentifier | |
| OpenMS::UniqueIdInterface::operator=(UniqueIdInterface const &rhs) | UniqueIdInterface | inline |
| operator==(const ConsensusMap &rhs) const | ConsensusMap | |
| OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) const | MetaInfoInterface | |
| RangeManager< 2 >::operator==(const RangeManager &rhs) const | RangeManager< 2 > | inline |
| OpenMS::DocumentIdentifier::operator==(const DocumentIdentifier &rhs) const | DocumentIdentifier | |
| OpenMS::UniqueIdInterface::operator==(UniqueIdInterface const &rhs) const | UniqueIdInterface | inline |
| pos_range_ | RangeManager< 2 > | protected |
| PositionRangeType typedef | RangeManager< 2 > | |
| PositionType typedef | RangeManager< 2 > | |
| privvec typedef | ConsensusMap | |
| protein_identifications_ | ConsensusMap | protected |
| RangeManager() | RangeManager< 2 > | inline |
| RangeManager(const RangeManager &rhs) | RangeManager< 2 > | inline |
| RangeManagerType typedef | ConsensusMap | |
| removeMetaValue(const String &name) | MetaInfoInterface | |
| removeMetaValue(UInt index) | MetaInfoInterface | |
| resolveUniqueIdConflicts() | UniqueIdIndexer< ConsensusMap > | inline |
| ReverseIterator typedef | ConsensusMap | |
| setDataProcessing(const std::vector< DataProcessing > &processing_method) | ConsensusMap | |
| setExperimentType(const String &experiment_type) | ConsensusMap | |
| setFileDescriptions(const FileDescriptions &file_description) | ConsensusMap | |
| setIdentifier(const String &id) | DocumentIdentifier | |
| setLoadedFilePath(const String &file_name) | DocumentIdentifier | |
| setLoadedFileType(const String &file_name) | DocumentIdentifier | |
| setMetaValue(const String &name, const DataValue &value) | MetaInfoInterface | |
| setMetaValue(UInt index, const DataValue &value) | MetaInfoInterface | |
| setProteinIdentifications(const std::vector< ProteinIdentification > &protein_identifications) | ConsensusMap | |
| setUnassignedPeptideIdentifications(const std::vector< PeptideIdentification > &unassigned_peptide_identifications) | ConsensusMap | |
| setUniqueId() | UniqueIdInterface | inline |
| setUniqueId(UInt64 rhs) | UniqueIdInterface | inline |
| setUniqueId(const String &rhs) | UniqueIdInterface | |
| sortByIntensity(bool reverse=false) | ConsensusMap | |
| sortByMaps() | ConsensusMap | |
| sortByMZ() | ConsensusMap | |
| sortByPosition() | ConsensusMap | |
| sortByQuality(bool reverse=false) | ConsensusMap | |
| sortByRT() | ConsensusMap | |
| sortBySize() | ConsensusMap | |
| swap(ConsensusMap &from) | ConsensusMap | |
| OpenMS::DocumentIdentifier::swap(DocumentIdentifier &from) | DocumentIdentifier | |
| OpenMS::UniqueIdInterface::swap(UniqueIdInterface &from) | UniqueIdInterface | inline |
| UniqueIdIndexer< ConsensusMap >::swap(UniqueIdIndexer &rhs) | UniqueIdIndexer< ConsensusMap > | inline |
| unassigned_peptide_identifications_ | ConsensusMap | protected |
| unique_id_ | UniqueIdInterface | protected |
| uniqueid_to_index_ | UniqueIdIndexer< ConsensusMap > | mutableprotected |
| UniqueIdInterface() | UniqueIdInterface | inline |
| UniqueIdInterface(const UniqueIdInterface &rhs) | UniqueIdInterface | inline |
| UniqueIdMap typedef | UniqueIdIndexer< ConsensusMap > | |
| uniqueIdToIndex(UInt64 unique_id) const | UniqueIdIndexer< ConsensusMap > | inline |
| updateRanges() | ConsensusMap | virtual |
| updateRanges_(const PeakIteratorType &begin, const PeakIteratorType &end) | RangeManager< 2 > | inlineprotected |
| updateUniqueIdToIndex() const | UniqueIdIndexer< ConsensusMap > | inline |
| ~ConsensusMap() | ConsensusMap | |
| ~DocumentIdentifier() | DocumentIdentifier | virtual |
| ~MetaInfoInterface() | MetaInfoInterface | |
| ~RangeManager() | RangeManager< 2 > | inlinevirtual |
| ~UniqueIdInterface() | UniqueIdInterface | inline |