| Program name | Description |
| dbiblast |
Index a BLAST database
|
| dbifasta |
Index a fasta file database
|
| dbiflat |
Index a flat file database
|
| dbigcg |
Index a GCG formatted database
|
| dbxcompress |
Compress an uncompressed dbx index
|
| dbxedam |
Index the EDAM ontology using b+tree indices
|
| dbxfasta |
Index a fasta file database using b+tree indices
|
| dbxflat |
Index a flat file database using b+tree indices
|
| dbxgcg |
Index a GCG formatted database using b+tree indices
|
| dbxobo |
Index an obo ontology using b+tree indices
|
| dbxreport |
Validate index and report internals for dbx databases
|
| dbxresource |
Index a data resource catalogue using b+tree indices
|
| dbxstat |
Dump statistics for dbx databases
|
| dbxtax |
Index NCBI taxonomy using b+tree indices
|
| dbxuncompress |
Uncompress a compressed dbx index
|