Repairs MALDI experiments which were spotted line by line.
The command line parameters of this tool are:
DeMeanderize -- Orders the spectra of MALDI spotting plates correctly.
Version: 1.11.1 Nov 14 2013, 11:18:15, Revision: 11976
Usage:
DeMeanderize <options>
Options (mandatory options marked with '*'):
-in <mzML-file>* Input experiment file, containing the wrongly sorted spectra. (valid formats:
'mzML')
-out <mzML-file>* Output experiment file with correctly sorted spectra. (valid formats: 'mzML')
-num_spots_per_row <integer> Number of spots in one column, until next row is spotted. (default: '48' min:
'1')
Common UTIL options:
-ini <file> Use the given TOPP INI file
-threads <n> Sets the number of threads allowed to be used by the TOPP tool (default: '1')
-write_ini <file> Writes the default configuration file
--help Shows options
--helphelp Shows all options (including advanced)
INI file documentation of this tool:
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:24 using doxygen 1.8.5 |